SAAP-148: Could New Peptide Gel Be Turning Point in the Antibiotics Arms Race?

Drug-resistance in bacteria has become a top threat to global public health. With antibiotic developments becoming slower than the drug-resistance increases in bacteria, will humankind ever gain the advantage?

Figure 1: Timeline of Antibiotic Discovery Dates. As it currently stands, no new discoveries of antibiotics have been made since 1987                                                 Source: Review on Antimicrobial Resistance

Luckily, new research from the Leiden University Medical Center in the Netherlands may bring this war to its much-needed turning point. Researchers successfully created an antibiotic gel containing synthetic anti-microbial and anti-biofilm peptides, SAAP-148. The research proved it was effective against five different antibiotic-resistant bacteria strains.

Published on January 10th in Science Translational Medicine, SAAP-148 gel was first created then tested against the group of antibiotic-resistant ESKAPE pathogens, an acronym for Enterococcus faecium, S aureus, Klebsiella pneumoniae, Acinetobacter baumannii, P aeruginosa, and Enterobacter.

When the SAAP-148 gel was used multiple times for each bacterium, no drug-resistance was developed. Co-author Anna de Breij claims this is because of how fast the peptide kills the bacteria.

SAAP-148 is a modification of the bacteria-fighting peptide LL-37 that is found in the human body.  Researchers discovered its bacteria-killing capabilities better than all other derivatives they made. Compared to the other modifications, SAAP-148 was the most powerful when it was tested in conditions similar to the human body.

This research is deemed important as The Infectious Diseases Society of America stated that antibiotic development is urgently needed for the ESKAPE pathogens. This conclusion is reached because of cases caused by the said strains being frequently reported in healthcare environments.

Since bacteria are becoming more immune to the current antibiotics available, finding new treatment and remedies to this issue is crucial. With these results, there is an opportunity for discovering a new class and generation of antibiotics that can help fight even the most resistant of bacteria.

Researchers are now planning clinical trials for the SAAP-148 gel, hoping to treat patients suffering from skin infections. Along with the researchers, the company Madam Therapeutics is working to create an injectable SAAP-148 formulation to treat bacterial infections inside the body.

-Brandon Kato

Figure 2: World Map of Current Mortality Rates From Antibiotic Resisting Bacteria Source: Review on Antimicrobial Resistance

References:

Breij, A. D.; Riool, M.; Cordfunke, R. A.; Malanovic, N.; Boer, L. D.; Koning, R. I.; Ravensbergen, E.; Franken, M.; Heijde, T. V. D.; Boekema, B. K.; Kwakman, P. H. S.; Kamp, N.; Ghalbzouri, A. E.; Lohner, K.; Zaat, S. A. J.; Drijfhout, J. W.; Nibbering, P. H. Science Translational Medicine 2018, 10 (423).

Boucher, H. W.; Talbot, G. H.; Bradley, J. S.; Edwards, J. E.; Gilbert, D.; Rice, L. B.; Scheld, M.; Spellberg, B.; Bartlett, J. Bad Bugs, No Drugs: No ESKAPE! An Update from the Infectious Diseases Society of America. https://academic.oup.com/cid/article/48/1/1/288096 (accessed Feb 8, 2018).

About IDSA. http://www.idsociety.org/About_IDSA/ (accessed Feb 8, 2018).

Madam Therapeutics. http://www.madam-therapeutics.com/ (accessed Feb 8, 2018).

Infographics. https://amr-review.org/infographics.html (accessed Feb 8, 2018).

Human Adaptation to High Altitudes

Tibetans. Image courtesy of: reurinkjan on Flickr

Have you ever climbed up a mountain and found it more difficult to breathe as you got closer to the summit? Tibetans do not have this problem because they have a gene that makes it easy for them to live at high altitudes. They got this gene from an extinct species of human known as Denisovans.

At high altitudes, people get altitude sickness because of the thinner air. When the body is unable to get the oxygen it needs, you start to breathe faster. Symptoms such as headache and loss of appetite start to appear and remain until your body gets used to the elevation change. Tibetans, however, are able to live at altitudes above 4,000 meters. They never experience altitude sickness despite having less hemoglobin in their blood than the average person.

In 2010, researchers found several genes that give Tibetans the ability to efficiently use low concentrations of oxygen. One gene, known as EPAS1, causes the regulation of hemoglobin production. The EPAS1 gene was sequenced from 40 Tibetans and 40 Han Chinese because they were once part of the same population 2,750 to 5,500 years ago. Emilia Huerta-Sánchez and colleagues found all of the Tibetans and two of the Han Chinese had a segment identical to the EPAS1 gene. The researchers searched genome databases and were unable to find anyone living with the same gene.

With no one living available, they compared the gene with sequences from extinct humans such as Denisovans and Neanderthals. There was a match with the Tibetan gene and Denisovan gene. Researchers checked that Tibetans got the gene from Denisovans by looking at sequenced genes from different parts of the world. They found that Tibetans inherited the gene in the last 40,000 years from Homo heidelbergensis, who passed the gene onto modern humans and Denisovans.

The evolution and geographic spread of Denisovans compared to Neanderthals and modern humans. Image courtesy of: John D. Croft on Wikipedia

Emilia Huerta-Sánchez and colleagues found that Tibetans and the Han Chinese got the EPAS1 gene by mating with Denisovans. This was possible because modern humans were not the only existing humans at the time. Denisovan fossils were found among modern human and Neanderthal fossils showing that all three species interacted with each other.

So why did all forty of the Tibetans sequenced have the EPAS1 gene, but only two of the forty Han Chinese have it? The gene was not beneficial for the Han Chinese because they did not settle in high altitude areas like Tibetans so they lost the gene over time. However, Han Chinese have been found to mate with Tibetans which is why the gene is still found in some of them. The gene was beneficial for Tibetans and through natural selection, the gene proliferated among their population causing their ability to thrive in high-altitude environments.


Want to know more about how Denisovans and Neanderthals relate to the modern human? Check out the video above!

– Sara Djondovic

References

  1. Davis, C. P. Hemoglobin (Low and High Range Causes). MedicineNet. https://www.medicinenet.com/hemoglobin/article.htm. Published November 8, 2017. Accessed January 13, 2018.
  2. Gibbons, A. Tibetans inherited high-altitude gene from ancient human. Science. http://www.sciencemag.org/news/2014/07/tibetans-inherited-high-altitude-gene-ancient-human. Published July 2, 2014. Accessed January 13, 2018.
  3. Healthwise Staff. Altitude Sickness. HealthLinkBC. https://www.healthlinkbc.ca/health-topics/ug3357. Published May 7, 2017. Accessed January 13, 2018.
  4. Huerta-Sánchez, E. et al. 2014. Altitude adaptation in Tibetans caused by introgression of Denisovan-like DNA. Nature. 0: 1-4.
  5. N.A. EPAS1 gene. U.S. National Library of Medicine https://ghr.nlm.nih.gov/gene/EPAS1. Published January 9, 2018. Accessed January 13, 2018.
  6. Wee, R. Y. Who Are The Han Chinese People? World Atlas. https://www.worldatlas.com/articles/who-are-the-han-chinese-people.html. Published April 25, 2017. Accessed January 13, 2018.

Weavable Light-Emitting Fibers for Wearable Electronics

Integration of electronics into textiles (e-textiles) has emerged as a promising new technology because it can offer tremendous possibilities in many fields of science and fashion, leading to new applications and products.

Organic light-mitting fibers woven into knitted clothes. Source: The Korea Advanced Institute of Science and Technology (KAIST)

Numerous studies have been dedicated to developing the organic light-emitting fibers for wearable electronics. However, conventional fibre-based light emitting devices have limitations of their much lower emission performance compared to those fabricated on flat substances. So, a research team led by Professor Kyung Cheol Choi in the School of Electrical Engineering at Korea Advanced Institute of Science and Technology (KAIST) in South Korea has developed a simple and cost effective solution which is a fabrication technique, using a low-temperature process. Using their technique, the team successfully fabricated the thin and flexible fibre-based organic light-emitting diodes (fiber OLEDs) without any reduction in performance.

A video below briefly introduces OLED fibers. See source here.

https://www.youtube.com/watch?v=J9keKez6ryY

In the manufacturing process, eliminating the high temperature and vacuum processes is crucial since fibers such as cotton, polyester, nylon are thermally delicate. So, the research team used a thermal annealing and dip coating method in cylindrical fibers at as low temperature as possible. 

The team also designed the structure of fiber OLEDs to improve the electron injection efficiency on the fibers and to employ a low-temperature thermal annealing processable cathode, which significantly impacts on its performance. According to the researchers, their revised structure clearly exhibited high luminance and current efficiency compared to those of previously reported fiber-based OLEDs. In addition, the dip coating method at low temperature improved surface roughness and sufficiently ensured the device stability without any planarization layer.

Moreover, the technology demonstrates the scalability of the proposed fabrication scheme with diameter ranging from 300μm to 90μm, thinner than human hair. The research team ensured that the fiber OLEDs could be weavable into textiles and knitted clothes without any reduction in emission performance because their inherent empty spaces and the wavy structures enhance flexibility and stress distribution of the OLEDs.

Fiber OLEDs with different diameters. Source: The Korea Advanced Institute of Science and Technology (KAIST)

Professor Choi emphasized the versatility for application on delicate fibers by stating that the technology to incorporate display screens into our clothing is now a reality, and organic light-emitting clothes will have a significant influence not only on the e-textile industry, but also on the automobile and healthcare industries.

A video below briefly shows how wearable e-textiles may be used in future.      See source here.

Reference:

  1. Seonil Kwon, Hyuncheol Kim, Seungyeop Choi, Eun Gyo Jeong, Dohong Kim, Somin Lee, Ho Seung Lee, Young Cheol Seo, Kyung Cheol Choi. Weavable and Highly Efficient Organic Light-Emitting Fibers for Wearable Electronics: A Scalable, Low-Temperature ProcessNano Letters, 2017; 18 (1): 347 DOI: 10.1021/acs.nanolett.7b04204
  2. The Korea Advanced Institute of Science and Technology (KAIST). (2018, January 10). Fiber OLEDs, thinner than a hair. ScienceDaily. Retrieved January 15, 2018 from www.sciencedaily.com/releases/2018/01/180110101019.htm
  3. The Korea Advanced Institute of Science and Technology (KAIST). (2017, September 4). Light-emitting fibers for wearable displays. AsianScientistNewsroom. Retrieved January 15, 2018 from https://www.asianscientist.com/2017/09/tech/oled-flexible-wearable-display/

-Subi Kim

CHEM300 Course Blog

Welcome to the CHEM 300 course blog!

Here are few things to make note of before you get started with your posts. First of all, you should read the blogging resources page under the Create menu. This will help you out a lot if you are brand new to using WordPress. On this page you will find video tutorials about writing posts on this blog, adding media to your posts, tagging, and categorizing. The course Canvas site has information about the blogging assignments and how they are graded.

There are a few important things to keep in mind when blogging. Please do not assume that just because something is online, it is OK for you to use it. For example, unless it is explicitly stated, an image on the internet can not just be copied, saved, and used in your own post without permission to do so. We’ve provided you with a lot more detail about properly using online content, but if you have questions, let us know.

Under the Explore menu, you will find links that may be of interest or assistance, a list of groups and associations related to communicating chemistry/science as well as a list of local museums and science centres. The Explore menu also contains a library resources page, which you should definitely have a look at. Finally, there is a bookshelf that lists relevant books that should be available for you in Woodward Library.

Let us know if you have any questions about the blog or would like to see any other resources made available. Or, if you find something that you think would be useful to the rest of the class, tell us, and we can add it to the resources. Better yet — write a post about it!

Happy blogging!

Robin Stoodley