Category Archives: Issues in Science

Synthesis of Palladium Nanoparticles: The Dawn of a Modern Mechanism

A portion of the proposed mechanism for synthesizing palladium nanoparticles.

So what are nanoparticles?  What are they good for, and why should we care about them?  Many of us might have heard of the terms “nanoparticles” or “nanotechnology,” but a good portion of us probably don’t know what these terms mean.  Nanoparticles are incredibly small objects that span no more than 100 nanometers in size; a nanometer is one billionth of a meter!  According to chemists and other scientists who study such tiny objects, nanoparticles behave as one whole unit regarding their characteristics and transport.

An image including several several nanoparticles with different sizes, visualized under transmission electron microscopy. One of these circular objects represents one nanoparticle; a group of nanoparticles is known as a nanocluster.
Image Source: Nanoparticle

Now that we’ve gotten definitions out of the way, what are nanoparticles really used for?  According to Nanoparticle Blog, nanoparticles have a variety of applications, such as in medicine, electronics, renewable energy, and more.  For example, according to Xiu et al. (2012), silver nanoparticles can aid silver ions to promote lysis in some bacteria, which is the process involving bacterial death by breaking their cell walls.

An image describing many applications of nanoparticles.
Image Source: Nanoparticle Blog

Although we know how to make use of nanoparticles, we do not necessarily know the mechanism behind the synthesis of these nanoparticles.  This unknown factor could be very important.  So far, for instance, chemists have understood that nanoparticles are made by mixing certain chemicals.  However, there are almost always byproducts that are formed along with the desired compound(s) in chemical reactions.  Let’s say that we’re using palladium nanoparticles to create a drug.  What if these byproducts changed the properties of a drug?  Thus, knowing the synthesis mechanism of such nanoparticles is potentially crucial with regards to how we use them.

Renee Man, a graduate student of the Department of Chemistry at the University of British Columbia.

Luckily, Renee Man, a graduate student of the Department of Chemistry at the University of British Columbia, together with Adam Brown and Dr. Michael Wolf published a scientific research article this year that proposed a mechanism directed specifically to palladium nanoparticles.

 

 

 

Below is a video that describes Man’s proposed mechanism and its advantages that make it an ideal model for the mechanism of palladium nanoparticles:

YouTube Preview Image

As mentioned in the video, there are three main important things to note when considering Man’s proposed mechanism of palladium nanoparticles.  First, one can synthesize palladium nanoparticles at low temperatures when following this mechanism.  Unlike other methods, used today, that require temperatures above 300˚ C, this mechanism works perfectly well at temperatures near 80˚ C!  This means that the reaction can be relatively much safer to monitor; no one likes to stand beside reactions taking place at 300˚ C.  Secondly, since the reaction can be done at lower temperatures, one can save a large amount of energy.  This leads us to the last but not least benefit of the mechanism:  by taking advantage of basic conditions, synthesis of palladium nanoparticles can be sped up by a significant amount, thus saving time, and again, energy.

Finally, below is a podcast of our interview with Renee Man.  The podcast mainly discusses Man’s research with respect to the mechanism for palladium nanoparticles and how the mechanism came about:

Audio clip: Adobe Flash Player (version 9 or above) is required to play this audio clip. Download the latest version here. You also need to have JavaScript enabled in your browser.

By:  Pedram Laghaei, Kathleen Leask, Alan Lam, and Fardad Behzadi

Video Credits:

Narrated by Alan Lam

Podcast Credits:

Narrated by Kathleen Leask

Special thanks to Renee Man for the interview.

How Sea Breezes Affect You!

The term sea breeze in itself seems rather simple. In fact, the every-day person probably believes that a sea breeze is, well, just a breeze – they are commonly overlooked. Yet they would be surprised to learn how much research actually goes into studying sea breezes that occur all over the world and the huge impacts that they can have on society as a whole.

Dr.Steyn from the University of British Columbia (UBC) has dedicated many years of his life to studying sea breezes and the different interactions they can have with the atmosphere. He has found that sea breezes and the winds associated with them are actually involved in the spreading of pollution all around the world.

Image showing energy plant releasing pollution into the air. Image by flickr user thewritingzone

How might this affect the general public? Well, our governments spend millions of taxpayer dollars to implement pollution reduction programs in their countries but fail to realize that much of the pollution that they are trying to cleanup actually comes from other regions of the world through wind circulation.

Furthermore, the growing shortage of fossil fuels has become a major problem in our society. Researchers estimate that the petrochemical supply will run out in about 50 years. We are fortunate to have researchers like Dr.Steyn, who are investigating
the occurrence and frequency of sea breezes, and are collecting a vast body of knowledge that could be used to substitute many forms of unsustainable energy.

In the video below, Dr.Steyn explains how sea breezes form, how they can actually help pollution spread, and how sea breezes data can be used for energy production.

YouTube Preview Image

As you saw, sea breezes can be a major contributor to the way in which pollution is circulated around the world and can greatly influence where and how we build wind energy farms in the future.

The story doesn’t end there. Not only is collecting data and understanding sea breeze important for pollution and energy, it also influences the way we live our daily lives. It is surprising how great of an impact sea breeze can have on society and how less people know about them. From the way we travel, to the way that we spend our free time, sea breezes are everywhere.

 Sea breezes can have a significant impact on the way that planes land at airports and how surfers spend their time in the water. These two everyday examples are influenced by the direction of the sea breeze. Sea breezes are very regular in that they are onshore by day and are offshore by night. During the day, the land heats up more than the ocean because it has a lower heat capacity.

Image showing how sea breezes blow during the day and night. Image from Mr.Bent’s Educational Blog

This creates a low-pressure system near the land and causes the sea breeze to blow towards the shore. On the other hand, the complete opposite occurs during the night, when the land cools and creates a high-pressure system. This results in the sea breeze blowing towards the water. Surfers call this type of breeze an offshore wind, which is highly desired as it hollows out the wave, allowing for a more radical surf experience.

The podcast below gives a more in-depth explanation of how sea breezes affect people’s day-to-day lives.

Audio clip: Adobe Flash Player (version 9 or above) is required to play this audio clip. Download the latest version here. You also need to have JavaScript enabled in your browser.

Hopefully, you’re convinced that the sea breeze is not just any breeze; it is a very important atmospheric phenomenon that may influence your lifestyle more than you care to know. They are not to be overlooked – they help planes land, circulate pollution but still, as we found when interviewing UBC students on their opinion about sea breezes, most people only pay attention to sea breeze when it “affects what [they] wear when it’s cold out.”

A special thanks to Dr.Steyn for the Interview.

By: Gagandeep, Grattin, Ki Won, and Dragana.

Panda Feces and Biofuel Production

These days that everyone is talking about climate change and increase in greenhouse gases, bio-fuels can be a good alternative to fossil fuels. Bio-fuels are liquid, gas or solid fuel that are produced from bio-masses such as corn, sugarcane, wheat, oil seed and so on. Production of these edible crops requires  high quality agricultural lands; using them for bio-fuel production can cause food scarcity, environmental concerns (replacing forest with crop lands) and economical costs. To minimize the negative effects of bio-fuel production on human beings, scientists are hoping to use  inedible super-tough plant materials known as lignocellulose  instead of using humans’ food source in production of bio-fuels. However breaking down lignocellulose in switch grass, corn stalks and wood chips requires high heat, pressure and harsh acids.

Who could imagine that solution to those limitations can be found in panda’s feces. There is an enzyme produced by bacteria found in panda’s gut that is strong enough to breakdown the tough plant materials. Researcher Ashli Brown and her colleagues have collected and analyzed panda’s feces and found several digestive bacteria that are similar to those found in termites that digest wood. Pandas eat 20 to 40 pounds of bamboo, leaves and stems everyday and have the ability to break down 95% of plant cellulose into nutrition. By isolating the bacteria in the giant panda’s gut, Brown is hoping to find the most powerful digestive enzyme that can be used in production of bio-fuels in order to genetically engineer this enzyme gene into yeast for massive production.

Using the enzyme contained within the giant panda’s gut in production of bio-fuels can be clearly faster, cleaner and less costly than the traditional method used today. This also can help in reduction of hunger by avoiding burning edible food source for bio-fuel production. Another point is that “The discovery also teaches a lesson about the importance of biodiversity and preserving endangered animals,” Brown said. I believe that every living thing such as plants or animals around us could be a beneficial source of products that may save our lives, so  we have to take action in saving those endangered plants and animals in order to save the beneficial resources that they provide us.

https://www.youtube.com/watch?v=flJCcyAUn24

Simin Yahyavi

Humans Will Breath Under Water

Have you ever tried to hold your breath for more than a minute under water? Well, if you had succeeded you were not reading this post! Holding breath under water has always been part of man’s dream. But it seems it will not be a dream for the future generations. According to a recent research  salamanders have developed the trait of producing oxygen themselves rather than taking it from atmosphere.

Baby under Water!

 

According to this study which was  conducted in Dalihousie University faculty of Zoology eggs of salamander , Ambystoma maculatum, were placed among chlamydomonad algae. The result of this experiment is that the DNA of the algae and the DNA of the salamander eggs were somehow combined. Algae is a nitrogen-dependent organism and produces oxygen gas as a form its waste. Salamanders on the other hand require oxygen to function and survive, and combining algae and the salamanders DNA would produce an organism which produces oxygen on its own and would not require oxygen  from atmosphere.

Salamander. Amphibian

Researchers have also found traces of this algae in mature salamander’s reproductive system which suggests that these algae are inherited to other generations.

What good is it to humans?

New technologies such as DNA Recombinant has enabled us to combine DNA strands of different species. In this technology, the wanted DNA is reproduced many times by molecular cloning in laboratory. These DNAs are then directed to the main DNA sequence by means of another organism and sequencing. Viruses are usually used in this step to deliver the multiplied DNA to the main DNA.

Formation of recombinant DNA requires a cloning vector, a DNA molecule that will replicate within a living cell. Vectors are generally derived from plasmids or viruses, and have the necessary sequence of DNA for replication. The inserted DNA may or may not express its codes depending on its place on the main DNA sequence. Thus, markers are used to place the DNA among functional genes.

Human DNA is packed with hundreds of viruses DNA s which have entered our DNA sequence along the course of evolution. This finding suggests that viral vectors can be used to alter human DNA sequence by means of insertion.  Recently, this technology has been used in the treatment course of of insulin-dependent diabetes. So, it’s not far beyond imagination if scientists mix algae DNA with that of human.

Soon the future of human beings will be altered with this technology and super humans will be produced! but until that day do not hold your breath for too long under water unless you are this guy:

References:

Canadian Journal of Zoology, 2008, 86(11): 1289-1298, 10.1139/Z08-115

 

Gluten-free diet: Necessary for all?

Gluten-free

(Picture resource: Power of food)

A gluten-free diet is a diet that excludes the protein gluten. Gluten is found in grains such as wheat, barley and rye. The protein gluten causes celiac disease which is an autoimmune disorder of the small intestine because of gene mutation. The vast majority of people who have celiac disease do not know it. Eating a gluten-free diet is a treatment for people with celiac disease by controlling their symptoms and preventing complications. People with celiac disease must eat a strictly gluten-free diet and must keep on the diet for their remaining lives.

Medical experts largely agree that there is a condition related to gluten other than celiac, called non-celiac gluten sensitivity. Non-celiac gluten sensitivity is a medical term used for someone who does not have celiac, but whose health improves on a gluten-free diet and worsens again if gluten is eaten. It could even be more than one illness.

Kristen Golden Testa, who is health program director in California for the Children’s Partnership, is one of the gluten-sensitive. Although she does not have celiac, she started a gluten-free diet. She says she has lost weight and her allergies have gone away. She did not consult a doctor before starting a gluten-free diet, and she also does not know whether avoiding gluten has helped at all. Also, she gave up sugar at the same time and made an effort to eat more vegetables and nuts. People like Ms. Golden Testa say that gluten-free diets have improved their health. They believe that avoiding gluten gives them more energy and alleviates chronic ills.

Dr. Stefano Guandalini, medical director of the University of Chicago’s Celiac Disease Center, said that “it is not a healthier diet for those who don’t need it. These people are following a fad, essentially”.

Experts also worried that people could end up eating less healthfully. A gluten-free muffin generally contains less fiber than a wheat-based one. Many grains are enriched with vitamins. Avoiding grains with a gluten-free diet may mean eating fewer of nutrition enriched products.

If you think you are having problems with gluten, you should be tested for celiac disease. You can’t cut out gluten before being tested. Celiac experts urge people to not to do self-diagnose. Celiac disease can be silent, causing damage you can’t see or feel, so you need regular monitoring and tests, especially since it’s so easy to be accidentally exposed to gluten. It is also highly recommended to visit a doctor or a licensed nutritionist before starting on a gluten-free diet.

Here’s a video more about gluten-free diet.

https://www.youtube.com/watch?v=yLJSmJ0bMlk

Reference

http://glutenfreeexpo.ca/

http://www.celiac.ca/

http://en.wikipedia.org/wiki/Gluten-free_diet/

http://en.wikipedia.org/wiki/Coeliac_disease/

http://www.glutenfreefind.com/

http://glutenfreediet.ca/

KiWon Min

Environmental Approach to Mining

From all the news and information about the environmental impacts that mining can cause, you may be thinking if mining is worth it with all the detrimental effects they come along with. Acid mine drainage, deforestation, erosion, and pollution are all examples of what mining can cause if the process is not tightly environmentally regulated. However, some companies are willing to take that extra step and approach mining in an environmental, sustainable way. One example is the Initiative for Responsible Mining Assurance (IRMA), an NGO based in Vancouver, B.C. (hurray for local initiatives), and they develop standards for environmental and responsible mining.

However, one of the biggest problems out there is the fact that most mining companies still use smelting as a method of purifying metals. In short, this method melts the desired metal out of its ore. This requires a lot of energy, as if we were to purify iron, it would have to heat it to 1250°C. If the mining plant is using fossil fuel as an energy source, this would be a huge problem and an extreme waste of energy. Also smelting produces a lot of waste unsuitable for release into the environment, such as SO2 gas and waste water. SO2 is highly responsible for acid rain formation and the waste water, high in dissolved toxic metals, would be destructive to environments.

There is a better alternative out there instead of smelting. During my Co-op placement, I have had the opportunity to work for Teck Resources, a Canadian mining company that focuses on environmental sustainability and safety. Instead of smelting, they use hydrometallurgy and different methods to extract metals out of ores. Instead of boring you with specifics how the process works, there are some key highlights that make this much more environmentally viable. Hydrometallurgy does not produce harmful products that are detrimental to the environment. All of its waste can be easily isolated, contained, and properly disposed of. Also, it is highly energy efficient compared to smelting. Because hydrometallurgy relies on aqueous reactions, hence the hydro prefix in hydrometallurgy, some reactions only require up to 130°C to carry through.

Copper plate, a final product of hydrometallurgy
Image taken from www.metchem.com.pk

I hope by reading this blog has given you some incite about the situation of mining right now. With all the news about environmental damage caused by mining and destroyed environments because of it, many companies have already taken the initiative to carry out their processes environmentally, while some still have not. In due time, the method of smelting will be replaced and mining all over the world will be approached in an environmentally friendly way.

Derrick Lee

Cholesterol’s role in heart disease

Causes of death pie chart (Image from http://www.sca-aware.org)

Causes of death pie chart (Image from http://www.sca-aware.org)

 

Heart disease is the leading cause of death in the world, and it has been long known that heart disease is highly associated with elevated levels of cholesterol.  Cholesterol is fatty substance which originates from dietary intake and liver production.  If you have thought of cholesterol merely as a measurement of obesity (which is not entirely wrong), you should keep in mind that an adequate level of cholesterol is vital to help your brain, skin, heart, and other organs grow and do their jobs in the body.

YouTube Preview Image

Cholesterol can be divided into two groups: LDL (low density lipoprotein) and HDL (high density lipoprotein).  LDL is called “bad” cholesterol, because it is the LDL cholesterol that forms plaques and is associated with heart disease.  HDL is called the “good” cholesterol, because HDL cholesterol actually extracts LDL cholesterol from artery walls and moves them back into liver, preventing atherosclerosis.

HDL vs LDL (image from http://www.ellies-whole-grains.com/)

HDL vs LDL (image from http://www.ellies-whole-grains.com/)

 

The LDL cholesterol is unarguably one of the risk factors that often make heart diseases deadly, but it has not been clearly understood why. However, University of British Columbia researchers David Fedida and Jodene Eldstrom discovered that cholesterol disrupts the flow of the electrical currents that generate the heart beat, causing cardiac arrhythmias (irregular heartbeats).

 

We have countless ion channels present in the membranes of all cells in the body, and they are key components in a wide variety of biological processes. The type of protein channels that are involved in the mechanism by which the heart’s electrical activity occurs is voltage-gated Kv1.5 potassium channel.

250px-Potassium_channel1

The heart undergoes depolarization (positively charged) as positively charged potassium ions move into the cell through Kv1.5 potassium channel. Shortly after depolarization, the heart releases potassium ions and returns its membrane potential to a negative value (repolarization).  The ion exchanges are regulated by Kv1.5 potassium channel.   The continuous depolarization and repolarization create small electric current.

All the cells with Kv1.5 potassium channel contributes to this process like little batteries, and the generated electricity flows through the heart as an impulse and the heart beats.  One important thing about this ion channels is that they are synthesized inside the cell and transported to the cell’s surface. They stay at the surface for only a few hours, and then they internalize back into the cells to be degraded or remade again.  Dr. David Fedida found that cholesterol disrupts this whole recycling process and affects the number of cells that can act as “little batteries”, causing the heartbeat to quicken, and eventually fail.  David Fedida explains that cholesterol-lowering drugs may help normalize the heart’s electrical activity.

Arrythmia

Small amount of cholesterol is inevitable for normal function of body. However, excessive cholesterol can lead to sudden cardiac arrest: the number one cause of death in the world.  This discovery of additional danger of cholesterol on coronary heart disease sheds light on sudden death in people with high cholesterol and opens ways to potential anti-arrhythmic drugs.

Andy Byun

The Large Hadron Collider – advancing our knowledge or our doomsday?

The Large Hadron Collider is the largest man-made high-energy particle accelerator, which aims to allow scientists to test theories of particle physics. Through the collider, Physicists hope to find answers to some of the world’s still unsolved mysteries, such as the existence of the Higgs boson, a.k.a the God’s particle. Ultimately, it would advance our knowledge about the universe that we live in, and address the questions as to how it all began. However, some people has raised concerns as to the safety of the collider, due to the nature of the amount of  energy involved in the experiments and of the many laws of physics still unknown to us. There is even a website called Has The Large Hadron Collider Destroyed the World Yet, signifying the existence of large amount of concerns from members of the scientific community and the general public.

The Large Hadron Collider lies in a tunnel 175 metres beneath the border of France and Switzerland near Geneve, Switzerland

Opposition of the large hadron collider has proposed two such “ways” the world as we know it will end because of the Large Hadron Collider:

Micro black holes

Although the theory of the large hadron collider would ultimately reach energies high enough to create black holes has been disproved by the Standard Model of particle physics, some extensions of the Standard Model do however predicts the possible existence of micro black holes during the operation of the collider. Unlike the widely known black holes, micro black holes loses mass quickly than it gains, and eventually dissipates and vanishes. Therefore they are deemed harmless by most theories of physics now known to man.

Strangelets

A Strangelet is a hypothetical particle that consists of equal number of up, down and strange quarks, the elementary particles that form matters. Physicists predict the creation of such particle would results in a fusion process in which all nuclei that form all matter in a planet would be converted to strange matters. However, currently models suggest that strangelets, even if they can be produced, are short-lived and unstable under low temperatures, where the collision occurs in energies higher than the stable environment in orders of magnitudes.

Current theories have predicted the probability of a catastrophic event happening because of the collider is virtually none. However, if you are one of the people that lose sleep thinking about possibility of the end of world, you can rest assured until the year 2015, because during which the Large Hadron Collider has been shut down for upgrades since the end of 2012.

Jonathan Lui