Author Archives: nsmyrnis

Getting a Grip on Hydrogen Fuel: Metal-Organic Frameworks

Hydrogen is  considered as one of the most volatile elements known to man. Yet, if this explosive hydrogen gas can be safely stored it can instead be used as a new fuel source, which would benefit the world at large. Recent advances in chemical engineering have produced a family of materials,  with the ability to efficiently adsorb (store) hydrogen gas. These materials, known as Metal-organic frameworks (MOFs), are a molecular structure that allows us the opportunity to take advantage of hydrogen as a fuel source. There are several benefits to using hydrogen as an energy source, one being that it can be readily produced for domestic use. For example, hydrogen can be generated from natural gas and biogas sources, as well as through the electrolysis (splitting) of water. This is favourable because the sources required to produce hydrogen are renewable, thus there is no need to worry about production shortages. Another advantage is that hydrogen is eco-friendly, in that using it in a fuel cell does not produce any greenhouse gases or air pollutants, and is not contributing to the effects of global warming.

In the following video, the basis of metal-organic frameworks in hydrogen gas storage is discussed, along with the associate research published by UBC graduate student Angela Crane:

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With so many potential benefits, you may wonder why MOF technology is not currently being utilized in hydrogen-fueled vehicles, to provide a viable green alternative. The problem lies with the MOF’s mechanism of hydrogen adsorption and desorption (release), where the flow of hydrogen in and out of the structure is, for the most part, only through methods involving extreme cooling and heating. This system of temperature-regulated gas delivery enables precise control over hydrogen flow and greater storage capacities, however it is an impractical system to adopt in vehicles.

Triptycene
Source: Animated

To remove the need of temperature for driving gas regulation and improving overall storage in the MOF structure, scientists are actively searching to optimize the material. They do this by increasing the available hydrogen binding sites and encouraging optimal pore-size, meaning hydrogen is better able to enter and remain in the MOF. In her research, Angela Crane investigats triptycene and pentiptycene, two large organic linkers with the potential for optimal pore size and orientation, thus being favourable in adsorbing hydrogen. When the MOF’s were tested for gas adsorption, however, she discovered that the complexity of the structure led to blockage of the pore-openings. This finding illustrates how the mechanics behind metal-organic frameworks are more complex than what one would expect from its relatively simple molecular structure.

Source Wikipedia: http://commons.wikimedia.org/wiki/File:IRMOF-1_wiki.png

Hydrogen fuel cells have the potential to revolutionize how we power the world. These devices lack all the liabilities associated with more conventional fossil fuels; most importantly pollution, and even other, less recognized concerns such as global conflict and of the depletion natural resources.  The current state of hydrogen fuel cell research has some significant drawbacks that will have to be addressed in order for this technology to become a viable alternative energy source. Currently, conventional methods for producing hydrogen gas relies on the use of methane, a fossil fuel, making this process inherently unsustainable. There is hope, however, in the way of MOFs, which may one day provide an effective storage medium for hydrogen gas, if a sustainable method of hydrogen synthesis can be found.

Information on the drawbacks of hydrogen fuel is available below:

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While the focus of metal-organic frameworks has been primarily based on hydrogen storage,  MOFs have shown potential in various other applications as well. MOFs are currently being implemented for a variety of uses; acting as filtration systems, drug delivery components, fluorescent-imaging vectors and catalytic systems, to name a few. Due to the relatively simple production process, MOFs have now become commercially mass-produced. With their basic structure and efficient manufacture, the future for metal-organic frameworks is not limited to hydrogen gas storage, and its broad spectrum of use gives these frameworks unprecedented potential.

-Natasha Smyrnis, Sungbin Choi, Gurneet Kalra

Group2

References:

The New Chemistry of MOFs, Metal Organic Frameworks

Deadly virus potentially carried by camels?

Camel Source:Wikipedia http://en.wikipedia.org/wiki/Camel

The fact that animals possess the ability to spread and give diseases to humans is universally known; a general example being the transmission of HIV from non-human primates to humans, a virus which has now infected millions worldwide. In the past year it is believed that the outbreak of the recently discovered MERS disease, too has an, albeit unusual, animal origin. MERS (Middle Eastern Respiratory Syndrome) was first detected in September of 2012, yet only in the past months have researchers been able to suggest that the source of this new virus is in fact camels.

Despite its recent appearance, MERS has quickly become a global concern as the disease is seen to have a high mortality rate, where nearly 50% of all 150 infected individuals have died. MERS patients generally display symptoms of fever, coughing and shortness of breath, which eventually can progress to pneumonia and/or renal (kidney) failure. MERS is caused by a species of virus known as the coronavirus, a type of virus that was also responsible for the SARS (Severe Acute Respiratory Syndrome) outbreak nearly ten years ago, a disease which displays similar symptoms to the of MERS.

Coronavirus Source:Wikipedia http://fr.wikipedia.org/wiki/Coronavirus

Researchers have been working tirelessly to gather more information on the source and viral characteristics of this potentially devastating disease, and their efforts have not been in vain.  As August of this year, scientist were able to locate and isolate antibodies (proteins selectively produced by the body to remove the virus) in numerous camels within Oman region of Saudi Arabia. Despite this not being a definitive proof of that camels are the true source of the virus, it does strongly suggest the possibility that the virus was first infecting camels and then was passed to human in close proximity. Scientists have also been able to determine that the disease itself is relatively difficult to catch. The virus has very poor person-to-person transmission, which means as of present, we have little to fear of this disease becoming an epidemic. Still, health and government organizations should not dismiss the potential threat of MERS, as viruses such as these can mutate and gain the ability to spread easily throughout a population, much like the SARS outbreak seen 10 years earlier.

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Natasha Smyrnis

References

Camel tests positive for Mers virus, Coronavirus

A “Blueprint” to Better Health

Source: Wikipedia http://commons.wikimedia.org/wiki/File: Drawing-syringes-with-needle.jpg

 With the coming of winter, flu season is upon us and many of our healthcare providers have begun encouraging us to get vaccinated against this deadly influenza virus. The threat of seasonal flu is felt across the globe, causing 250,000 to 500,000 deaths per year, and is the first leading cause death by infectious disease in children. Despite its occurrence being so widespread, there has been no vaccine developed that can provide complete protection from the virus, that it is to say, no vaccine until this past year. Researchers at the Imperial College London have recently come up with a “blueprint” for, what they believe to be is, a universal flu vaccine.

This theoretical vaccine would be taking a newer approach to vaccination, and could potentially be used against all existing forms of the flu as well as any new flu strains that may develop. One of the reasons for the flu being an annual reoccurring problem is that the virus has the ability to continuously change its outer physical characteristics, so that it is no longer recognized by your body’s immune system; in particular by your antibodies.

Influenza Virus: Source Wikipedia http://en.wikipedia.org/wiki/Virus

All conventional vaccinations act to provide the body with antibodies against a specific pathogen type, so that when you are exposed to that disease your body will be prepared to easily clear the infection. While this form of vaccination is successful against many diseases such as small pox, diphtheria, and measles, it is much less effective against the influenza virus as the changing of the viral-surface renders the antibodies obsolete. The aim of this new universal vaccine, however, is not to activate the immune system’s antibodies but rather activate an entirely different area of our immune system, that being our CD8+ T-cells.

CD8 Tcell Source Wikipedia: http://commons.wikimedia.org/wiki/File: Blausen_0625_Lymphocyte_T_cell.png

Rather than recognize a virus by its surface characteristics, as is the case with antibodies, a CD8+T-cell will identify a virus by its internal material that is common to all strains of that virus. Now you may ask, if there is another more effective way of clearing the flu, why doesn’t our body simply use  T-cells and forget about antibodies? The problem is, that when faced with infection, our body is ‘hard-wired’ to first use an antibody response since that is usually the best defence against most diseases. Unfortunately that is not the case with influenza, and it is for that reason that this new vaccine aims to by-pass the antibody response and activate the T-cell response instead.

Despite the discovery that T-cell mediated immunity is effective against the flu and that a theoretical blueprint has been made using this information, an actual vaccine which can be mass-produced and distributed is still quite a few years away.  However, researchers are encouraged by their results thus far, and believe that an effective vaccine is not only plausible, but inevitable.

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-Natasha Smyrnis

References

Cellular immune correlates of protection against symptomatic pandemic influenza, Scientists take big step towards universal flu vaccine, Vaccination, CD8+ T cell effector mechanisms in resistance to infection.

Sharks are taking a bite out of antibiotic resistance

Figure 1
Source Wikipedia :http://en.wikipedia. org/wiki/File:Ritalin-SR-20mg-1000×1000.jpg

In our fight to eradicate infectious disease and through the rigorous use of antimicrobial agents, our medical practices have inadvertently created new strains of heavily drug resistant bacteria or super bugs. What is the most concerning aspect of this superbug development, however, is that the root cause isn’t poor sanitation on the part of the patients or hospitals but the misuse and overuse of antibiotics and disinfectant. This brings to light a new question, should we really be inhibiting the spread of pathogens (and in turn drug resistance) by prescribing even more antibiotics? Or is there  another simpler solution, where their growth is limited non-chemically?

Figure 2: Sharklet vs. sharkskin Source Sharklet Technologies: http://sharklet.com/wp-content/uploads/2010/02/compare-photo.gif

That was the realization that researchers happened upon through their observations of none other than sharks. They were able to determine that a shark’s skin not only possesses hydrodynamic qualities but antimicrobial properties as well. Yet what is so intriguing about this discovery is that a shark’s bacterially resistant exterior was due only to its skin’s microscopic shape and texture, and not to any sort of chemical reagents found on the skin. A shark’s skin consists of something known as dermal denticles (second image in Figure 2), which are a miniscule network of diamond shaped scales. The riblets found on these scales as well as their spatial arrangements are what discourages microbial habitation, making shark’s skin a non-chemical bacterial growth inhibitor. Following this research, scientists proceeded to synthetically replicate sheets of these dermal denticles, eventually creating a product known today as Sharklet (first image in Figure 2).

Figure 3: Flat vs dentricle surface adhesion
Source Sharklet Technologies: http://sharklet.com/wp-content/uploads/2010/02/img-research-results.jpg

Sharklet makes use of a diamond shaped (dentricle) pattern of riblets, each one measuring to approximately 20 micrometers in length, to create a disruptive surface that discourages biofilm formation (colonized bacterial cell growth). It does so by possessing a surface on which bacteria must use great amounts of energy to successfully adhere and reproduce. This high stress environment does not encourage bacteria to take up residence, causing them to dissociate to either colonize a more favourable environment or perish. After much initial testing, Sharklet has been shown to greatly reduce bacterial bioadhesion and growth  in comparison to non-dermicle (eg. flat) surfaces, making it a viable option for device and surface coverings that are frequently handled in hospital environments.

Granted, Sharklet should not be seen as a cure to a patient’s bacterial infection but rather as a method to reduce the spread and transmission of bacteria. This reduction would correlate to a decrease in the amounts of infected individuals, which in turn would lessen the overall use of antibiotics and disinfectants, giving bacteria less of an opportunity to develop antibiotic resistance.

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-Natasha Smyrnis

References: Sharklet Science, Antibiotic Resistance in the 21st Centuary: A Clinical Super-ChallengeDr. Anthony Brennan: Sharklet Founder