Tag Archives: genetics

Chimeras: Not as Fictional as You Think

Chimera [ki-meeruh] usually defined as:

1. n. A mythological, fire-breathing monster, commonly represented with a lion’s head, a goat’s body, and a serpent’s tail. (source)

However, there is also a lesser known genetic definition:

2. n. An organism composed of two or more genetically distinct tissues, as an organism that is partly male and partly female, or an artificially produced individual having tissues of several species. (source)

Now this definition is applicable in the real world.

DNA to chromosome Image source

One type of chimerism is tetragametic chimerism. Tetragametic chimerism occurs when different sperm fertilizes two eggs. Two zygotes develop and then fuse together, this isn’t effected by gender difference. The remaining zygote has two distinct sets of DNA and therefore 46 pairs of chromosomes instead of the typical 23. When the fetus develops the organs have different DNA types, for example, their liver will have one set of DNA and their lungs the other set of DNA. Observable chimera phenotype characteristics are differences in the pigment of their eyes, hair and patches of skin, also a possibility of extraneous sexual organs.However, in humans the condition is rare, most have no presenting abnormal characteristics and live completely unaware.

Two infamous cases of tetragametic chimerism in humans are Karen Keegan and Lydia Fairchild.

Keegan needed a kidney transplant and her children were tested as potential matches. The results showed that only one of her three children was actually related to her. After extensive testing on Keegan’s different organ tissues researchers discovered, and published in 2002, that Keegan had 46 pairs of chromosomes and was a natural chimera.

In 2005, Fairchild discovered she had different DNA from her two children after DNA testing done to get welfare aid. She was accused of welfare fraud and threatened to have her children taken from her custody. When her third child was born and DNA testing was negative again, she was under the suspicion that she was lying as a surrogate or had acquired her children illegally. Only after presenting the published chimera paper on Keegan, Fairchild was tested and proven as a chimera as well.

Presently, scientists are researching if chimera organisms have better immunity or if the genetics can be used for future biological advances. Unnatural chimeras such as ‘geeps’, a fusion of a sheep and goat embryo, have already been successfully created as well as human and animal fused embryos. Using these hybrids, however, involves stem cell research and genetic engineering, which brings up major ethical problems and controversy in the scientific community.

So, we’ll never have mythological fire breathing creatures, but you have to admit it’s still pretty darn cool.

– Rachel Chang

 

The language of DNA

Within each and every living organism, there are millions of books describing things from “how to move” to “how to eat”. These books are written in DNA: language of life. Ultimately, DNA is how nature writes about how to live, and the readers are how all living (and some “dead things”) survive. Even your own body is reading from your own library as you read this blog.

But within this massive collection, we, as people, cannot read most of it because we do not yet understand the language.

However, what we have figured out, thanks to genetics, cellular biology, and biochemistry, are the basic letters of these books; we have the codon table.

Codon Table

The codon table encoding the 20 essential amino acids used in all walks of life. Obtained as a screen capture from http://en.wikipedia.org/wiki/DNA_codon_table

What this codon table tells us is the 20 letters of the DNA alphabet, representing the 20 amino acids. When there are multiple letters together, they can spell a word, also known as a protein.

We have also figured out some parts of these books through areas called open reading frames. These areas use a process called transcription and translation, which is described in the following video found on youtube posted by redandbrownpaperbag.

YouTube Preview Image

We also have clues and insights into some other parts of these books, namely the promoter and termination sequences. These parts tell us where there is an open-reading frame, essentially acting as quotation marks to direct the cell’s attention to a specific location.

Despite all these advances in understanding the language, we know very little in reality.

First of all, there are no known “rules” to writing words, because a word can be as short as 2 letters to as long as a million letters.

Secondly, we do not have a clear picture of how different areas within the genome that are neither open reading frames nor promoters/terminaters interact with the cell, or why those books are there in the first place. These sequences are currently hypothesized as useless, but may be useful as the ENCODE project suggests.

Finally, some words, even with the same spelling, can have many different meanings when they are in different compartments of a cell, so figuring out what they actually mean is quite difficult.

The secret language of DNA might one day be uncovered; someone who can speak “DNA” might be able to take a piece of DNA and then tell us exactly what that DNA is used for, which can advance science from treating and preventing disease, finding new applications for cells (i.e. sustainable fuel), or even figure out what consciousness is. Knowing how to read DNA can open up a brave new world in understanding life as we know it.

Just like how the discovery of the Rosetta Stone lead us to understand the Egyptian language, we may be able to slowly construct our own Rosetta Stone, through genetics and biochemistry, to unravel the mystery of DNA.

The hope is that one day, understanding an organism will be as simple as reading a book.

– Tony Hui