Author Archives: carly gardner

GEOB 479 Final Project: Mapping Lung Cancer

Here’s the abstract of our final project, also available for viewing at blogs.ubc.ca/mappinglungcancer.
TITLE

Lung Cancer Mortality in the Eastern United States: A Geographical Perspective

AUTHORS

Carly Gardner and Evan Morrow

OBJECTIVES

We examined geographic patterns of lung cancer mortality in the eastern United States. We focused on counties in order to reveal smaller scale variance in environmental and socioeconomic factors associated with lung cancer.

METHODS

We used ESRI’s ArcMap to generate hot spot maps and to conduct ordinary least squares (OLS) and geographically-weighted regression (GWR). County-level socioeconomic data was provided by the US Census Bureau (1999, 2000). Lung cancer mortality rates were collected from the Centers for Disease Control and Prevention WONDER Online Database (1999-2003). County-level smoking prevalence in 1999 was provided by Dwyer-Lindgren et al. (2014).

RESULTS

The GWR had a higher adjusted r-squared value (0.62) than in OLS Models 1 (0.48) and 2 (0.54). Highest local r-squared values were present on the western side of the region, particularly in northern Georgia, northeastern Alabama, and Tennessee (0.64 – 0.72). The proportion of rented homes, proportion of non-white population, median income and radon risk were each significantly associated with county-level lung cancer mortality rates, relationships that were spatially non-stationary across the eastern United States.

CONCLUSION

The results of our analysis indicate that, aside from smoking prevalence, there are numerous statistically significant variables that are associated with lung cancer mortality. Our analysis provides evidence that the associations between lung cancer mortality and numerous socioeconomic and environmental parameters vary across space. It calls for local context-specific efforts to address lung cancer mortality in the eastern United States.

Lab 4: Crime Analysis using CrimeStat

For this lab, the spatial relationships of crimes in Ottawa, Ontario were analyzed using a series of CrimeStat tests and ArcGIS mapping. We focused on automobile theft, commercial and residential break and enters. CrimeStat tests generated nearest neighbour and Moran’s I indices. ArcGIS was used to map crime spatial relationships visually using fuzzy more, nearest neighbour hierarchical clustering, and kernel density functions. The Knox index was used to compare the temporal relationships between car thefts and space. Continue reading

Use of GIS by Fire Departments

Today’s lecture explored the ways in which the Calgary Fire Department (CFD) uses GIS to improve public safety. Applications included risk analysis, response mapping, operational decision making, station planning, apparatus deployment and station relocation.

The CFD assesses and analyzes risk by collecting survey data of structures at risk, taking into consideration potential exposure due to close proximity, and accessibility to emergency vehicles (narrow streets can limit the amount of space for response vehicles).

Another interesting use of GIS in emergency planning was how the CFD maps emergency response times. It is a great example of a simple analytical procedure with very important implications.

The CFD also maps monthly calls, property loss, fire-related deaths, station and hydrant locations, historical fire loss, as well as oil & gas locations. All of these applications can help maintain and improve public safety – a feat that is particularly relevant for Calgary, the fastest growing city in Canada.

It is clear that GIS is a powerful tool in operational decision-making.

Is Crime Related to Geography?

Remember those scenes in Criminal Minds or CSI, when the quirky detective has poked a bunch of pins into a map, haphazardly connected strings  to a bunch of creepy photographs, and all of a sudden they’ve figured out where the killer is?

That, my friends, is another cool application of geography. There was even a specific show dedicated to using GIS to catch criminals – the now discontinued CBS show, “The District.”

In today’s lecture, we learned about the role of GIS in environmental criminology. We covered various applications of crime analysis and several real world examples. But first, we focused on three primary theories used in environmental criminology:  Routine Activity, Rational Choice and Criminal Pattern Theory. Continue reading

PRESENTATIONS: Crime and Geography

Class was cancelled on Friday, so the geography students didn’t have to present the assignments we had created. But, we did get to listen to the presentations from the GEM students!  This week’s topic was crime and geography.

One particularly interesting (but rather depressing) presentation was called A Geospatial Analysis of Suicidal Bridge Jumping in the Metro Vancouver Regional District from 2006 to 2014. Suicide was decriminalized in 1972, but it is still relevant to this week’s topic.

The study by Lam, Kinney and Bell was interested in how suicide victims navigate their environment to choose a preferential place for committing suicide. Using the network analyst tool in ArcGIS, the authors found that most victims are willing to travel further distances to jump from more iconic and symbolic locations, such as Lionsgate Bridge (the most popular location to jump in Metro Vancouver). These victims were classified as ‘travel jumpers,’ in contrast to the much smaller number of ‘convenience jumpers’ (those who jump from locations that are close to their homes).

The paper Evan and I covered was called Space-Time Dynamics of Crime in Transport Nodes by V. Ceccato and A.C. Uittenbogaard. The objective of this study was to assess space-time variations of crime at underground stations in Stockholm, Sweden. They began with two hypotheses:

  1. Crime in underground stations reflects rhythmic variations of human activities (hourly, daily, weekly and seasonally).
  2. The specific vulnerability to crime of a transport node varies over time and space.

The analysis used ANOVA and Sheffe’s test and OLS regression models to check for crime variations over time. The paper outlined many of their results in great detail. Some of their findings were that:

  • peaks of crime in late afternoons and evenings, when most people are on the move. Therefore there is a greater risk of victimization.
  • most crimes late in the evening and night were violent.
  • vandalism takes place more often during late evenings.
  • thefts occur most often in the afternoon and early evening.

All in all, we awarded this paper a 7/10. The methods and results were meticulously outlined (but almost too much – it was quite overwhelming to read). The OLS model was properly specified, and variables with potential multicollinearity were removed. Although acknowledged, there was potential for subjectivity when quantifying data such as the station atmosphere and environment. These were values that were rated on a scale according to the personal impressions of the two researchers. They also could have gone further with data visualization – it was a lost opportunity!

Applications of GIS in Health Geography

Today’s lecture focused on the major applications of GIS in health geography:

  1. Environmental hazards
  2. Modelling health services
  3. Identifying health inequalities
  4. Spatial epidemiology (the focus of today’s lecture)

This lecture covered multiple definitions of health and disease, discussed how location matters. The focus was on spatial epidemiology, or “the study of the distribution and determinants of health and disease-related states in populations, and the application of this study to control health problems” (slides). To study disease, we need measures of its occurrence such as counts, prevalence, incidence, and mortality. It is also useful to use a small area of analysis in order to explore the existence of a relationship between variables (such as environment and health). We can control for other relevant factors using regression.

It is important to recognize that a small scale may present issues with your analysis:

  1. Spatial misalignment
  • This can become an issue especially when you are using data from different institutions. Misalignments may not have posed an issue at smaller scales, but a large scale (small area) analysis makes these spatial discrepancies obvious and problematic.

2. Uncertainty

  • How often is population data collected? Are we confident about it’s quality? Is it accessible/available to use? How do you measure a population’s exposure to an environmental variable? Are environmental impacts distinguishable from lifestyle or socioeconomic impacts on health?

A take-home point was that doing analysis of disease rates or counts in small areas often involves a trade off. How do we balance statistical stability of the estimates and geographic precision?

What is Health Geography?

It shouldn’t come as a surprise that health and geography are intrinsically linked. The places we spend time in influence our access and exposure to determinants of health – pollutants, disease, food and nutrients, health services, and more.

The lecture included examples such as the relationships between climate, elevation & distribution of malaria, as well as the connections between exposure to fast food restaurants and childhood obesity rates. These were definitely useful to generate potential topics for the class project.. (perhaps the geographical distribution of radon and incidences of respiratory cancer?)

We compared definitions and perspectives of medical and health geography, epidemiology and environmental justice. Health geography combines qualitative and quantitative methods, and considers the special role of “place”  in determining health. A geographical perspective is useful because we, as geographers, tend to focus on the relationship between people, place, and “space.” In this vein, geographers emphasize the importance of considering local contexts (including societal factors).  A regional/national/international scale of study can be useful, but it is not sufficient. This unique contribution to health geography research can be observed in methodological developments including multi-level statistical models, cluster analysis and geographically weighted regression.

PRESENTATIONS: Health Geography and GIS

This week was another round of presentations! As the title of this post implies, the topic of this assignment was health geography and GIS.

My favourite presentation was regarding the research paper: Using geographically weighted regression for environmental justice and analysis: Cumulative cancer risks from air toxics in Florida. This study focused on two research questions:

  1. Are cumulative lifetime cancer risks from ambient exposure to multiple sources of hazardous air pollutants distributed inequitably with respect to race/ethnicity and socioeconomic status across Florida?
  2. How does the direction and significance of statistical relationships between cumulative lifetime cancer risk and race/ethnicity or socioeconomic status vary across the state of Florida?

The paper used both Ordinary Least Squares and Geographically Weighted Regression in their analyses. The found a significant positive relationship between the proportion of Black, Hispanic and Asian residents and cancer risk, and a significant negative relationship between population density, poverty and cancer risk.

This presentation has gotten me thinking about ideas for the final project! It might be interesting to explore other geographic patterns of health…

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This week was Evan’s turn to present on our behalf. The research paper we chose was A GIS-environmental justice analysis of particulate air pollution in Hamilton, Canada by Jerret at al., 2001.

The two primary objectives of the study were to analyze the relationship between total suspended particulate (TSP) exposure and socioeconomic variables such as income, unemployment and housing value with an environmental justice/equity framework; and to look at how sensitive the relationship between air pollution and socioeconomic variables is to specification of exposure estimates or statistical models.

To do this, they created two different exposure maps (chronic and extreme) which were input into OLS and simultaneous autoregressive (SAR) analysis with socioeconomic data (income, dwelling value, unemployment rate etc). They found that there was a difference in significant variables depending on the model used. For instance, dwelling value and low income were significant in OLS models, but in SAR the low income variable was replaced by unemployment. In both models, dwelling value was the most significant independent variable. They also found that highest exposure zones have a twofold increase in total suspended particulate concentrations and a more than twentyfold difference in probability of exposure to extreme events than lowest exposure zones.

All in all, we gave this paper an 8/10 because their findings generally aligned with other research, steps were taken to properly specify the models, and sources of error and uncertainty were acknowledged. Their maps are simple and effective. Our primary complaint was that the models are slightly outdated now.

Lab 3: Geographically-Weighted Regression

As mentioned in my previous post, Geographically-Weighted Regression (GWR) is an extremely effective regression model for spatial analysis, especially when there may be regional variance in the relationships between independent and dependent variables.  GWR allows us to explore the local relations amongst a set of variables, and to examine the results spatially using ArcGIS; it can even produce raster coefficient surfaces which allow us to see any regional variation in the relationships of the parameters! We can see if the variables and residuals of the model are spatially dependent or spatially autocorrelated. Continue reading

Statistics: A Review

This week’s lecture focussed on reviewing the basics of statistics. Statistics are important because they enable us to summarize, to explore, to look for relations, and to predict. We focussed on regression, a quantitative approach that allows us to model, examine, and explore spatial relations. It can help us understand the factors behind spatial relations, and even allow us to make predictions through modelling. Continue reading