Category Archives: Science in the news

Bleeding Horseshoe Crabs For Science

Image Courtesy of Public Domain Image

Unknown to the masses, half a million horseshoe crabs are captured each year and bled alive to sustain unparalleled biomedical technology.  Anyone who has received an injectable medication will have benefited from the blood of horseshoe crabs. The beautiful and stunning baby blue colored blood stands out as it relies on copper instead of iron, which is found in most other organisms, to deliver oxygen throughout the body.

Discovered in the 1960s by Dr. Frederik Bang, the blood of horseshoe crabs was found to have the ability to detect pathogens in its environment. The amoebocytes contained in the blood would surround the pathogens and immediately clot up; thus, preventing infections and the spread of pathogens throughout the body in an effective manner. The blood acts like a form of primal antibiotics, and is the main line of defense for the immunity of the horseshoe crabs. Keep in mind that horseshoe crabs reside in habitats that are filled with an assortment of pathogens. This has led them to develop a unique and distinct immune system.

Collaborating with Dr. Jack Levin, the two researchers took advantage of the unique properties found in the blood and concocted a cell-free reagent otherwise known as Limulus amoebocyte lysate (LAL). LAL would help solve an ancient problem that had been plaguing the medical industry for decades, and improve overall quality of care.

Previously, many injectable medication thought to be sterile would cause infections, and severe symptoms in patients. After thorough investigation, researchers found that the medication was riddled with endotoxins.  Endotoxins are lipopolysaccharides derived from the outer membrane of gram-negative bacteria, and even trace amounts can result in unpleasant and negative side effects in the human body. Endotoxins cannot be removed even with steam sterilization, and are almost impossible to detect without the blood of horseshoe crabs. The Limulus amoebocyte lysate is used for detection purposes and plays a critical role in quality management of the medications that are approved for administration.

Highly trained professionals and licensed facilities are responsible for bleeding horseshoe crabs. Every year, horseshoe crabs are collected from their habitats, and brought to a specialized facility where they are cleaned and bled once a year. Only 30% of the blood will be removed, and the horseshoe crabs will be placed back into their natural habitat. The survival rate after these procedures remain relatively high at over 97% as the crabs are treated with the utmost of care. Horseshoe crabs that are released can easily integrate back into their society, and detailed follow-up researches have indicated that the crabs do not suffer from any post-traumatic stress, which may result in decreased reproductive ability.

Horseshoe crab blood has become the standard used for testing purposes, and the blood has become much more valuable than gold. In fact, a quart of horseshoe crab blood is estimated to have a value of $15000, and this part of the industry has become rather lucrative over the years.

For more information, visit here for a more detailed documentary.

Literature Referenced: 

The Horseshoe Crab.  2009. Medical Uses. Retrieved from: http://www.horseshoecrab.org/med/med.html

Tomato Leaves Provide Insight to Natural Selection

By looking at differences that are found in domestic and wild tomato leaf DNA and traits, Dr. Chris Muir, from UBC Biodiversity Research Center, can confirm that the driving force behind all changes observed in physical traits are due to natural selection. Genetics account for various differences observed, and are responsible for making all organisms unique from one another.  Naturally, some differences are more fitted for survival in the environment than others. Thus, some traits tend to dominate, and organisms with these traits have a higher survival rate. The video below examines the concept of natural selection:

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Dr. Muir’s research builds on top of previous research experiments, as it uses genetic data collected by the Tomato Genetics Resource Center to determine where mutations lie. The Tomato Genetics Resource Center provides visualizations, which maps out where mutations are located. These images are known as introgression lines as pictured below. Each line is a different gene, and the shaded regions account for different types of mutations.

Image 1: Introgression Lines Courtesy of Tomato Genetics Resource Center

Determining which mutations are responsible for physical traits in the leaves is like doing a puzzle.  Dr. Muir would look at which differences could be found in physical traits of the tomatoes, and where the mutations were in that particular tomato. If the same physical traits were constantly being altered, such as leaf thickness, and the same regions of genes were affected, the two are likely to be correlated.

Instead of focusing on the entire tomato, Dr. Muir focused on leaf traits. He looked at several different types of leaves, which physically looked quite different from one another.

Image 2: Different variations of leaves in various types of tomatoes courtesy of Dr. Muir

The traits that were measured included leaf surface area and weight, as well as density and location of stomata and trichomes. Both stomata and trichomes appear to be rather complex terms, but they are merely scientific terms used to describe the pores and hairs, respectively, present on leaf surfaces. Both are responsible for regulating transpiration, leaf temperature, and other crucial cellular activities.

Although commonly overlooked, leaves are important to each plant’s survival. Leaves are responsible for growth stimulation of plants (Lam and Leopold 1966), and for photosynthesis – the harvest of energy. The size of the leaves, and the amount of stomata or trichome would influence the plants’ ability to survive in different environments.

Dr. Muir’s work was tedious, but rather simple. Using scanners, he measured the surface area, and using a scale, he measured the weight.

Image 3: Describing the Role of Stomata courtesy of Berkeley Education

He used an interesting application to examine the stomata and trichome. He applied clear nail polish, and look at the hardened impressions underneath the microscope.

The results were clear. Different types of tomatoes had distinct, unique traits that helped it to survive in the environment. Natural selection played a role in making these changes happen.

Dr. Muir’s work can be applied to many industries, and used in a variety of applications. To learn more, listen to the interview with Dr. Chris Muir below:

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Science 300 Group 3 – Christy Kwok, Sophia Hu, Claire Curran, and Felix Tang

Literature Referenced:

Lam, S. and Leopold, A.C. 1966. Role of Leaves in Phototropism. Plant Physiology. 41:847-851

Moyle, L.C., Muir, C.D. and Pease, J.B. 2014. Quantitative genetic analysis indicates natural selection on leaf phenotypes across wild tomato species (Solanum sect. Lycopersicon; Solanaceae).

New Glue Could Fix that Wounded Heart!

Ever watched the TV show Star Trek, where Captain Jean-Luc Picard is stabbed in the heart but yet survives due to a device that stitches wounds in the heart? Now, researchers have found an adhesive of similar function where rather than using stitches or staples, this glue repairs heart wounds which are as strong as the alternatives while avoiding complicated procedures.

A new glue could be used to seal tears in heart tissue or blood vessels.

Inventors, Jeffrey M. Karp, an associate professor of medicine at Harvard Medical School, andDr. Pedro del Nido, a cardiac surgeon at Boston Children’s Hospital explains how staples and stitches can cause problems. Each pass of a suture (stich) needle, the tissue needs to be realigned and staples can damage the tissue and moreover, it requires the process of removal. In order to solve these problems, the researchers aimed to design a water-repellent glue that could harden quickly and create a seal that could withstand the stress in a beating heart.

The liquid glue is applied either on a patch and then placed on to the hole in the tissue (shown below) or directly to the tear of the blood vessel or the intestinal wall until the glue is hardened.

The glue is used with a patch to repair a wound in the heart tissue.

The surgeon then shines ultraviolet light onto the glue which results in a rubbery substance that merges with the heart’s collagen due to the glue molecules binding with the collagen fibres creating strong chains.

This adhesive has been tested on rats and pigs and have successfully shown that it helps seal the wound quicker than other adhesives that exist. In addition, “some of those adhesives require that the tissue be dried for the adhesive to stick, while others aren’t compatible with certain types of tissue,” Karp says.

Human trials are still necessary in order for use in the clinic but the researchers are optimistic that they will be able to utilize this in Europe by the end of 2015.

– Yuri Tomura

Home Away From Home?

At the recent Search for Life Beyond the Solar System conference in Arizona, it was announced that an Earth-sized planet had been found orbiting a star’s habitable zone. Thomas Barclay, a NASA astronomer, looked at data collected by the Kepler telescope to determine the characteristics of this planet. However, he’s been quiet about the details, waiting until his research is published.

Area in Kepler Telescope’s Range of View (Source: NASA)

At least we know the important part: it orbits in the habitable zone. Many scientists believe that liquid water is necessary for life to exist and while this may an Earth-centric view to take, so far it seems like liquid water is most associated with life.  While we don’t know if there is water on this planet, we know that its distance from its host star means that it’s cool enough for water to condense yet warm enough for it to not freeze.

The second most important part is its size: its relatively small size (1.1 times the radius of Earth) among all the exo-planets detected means that it’s the first Earth-sized planet to be found orbiting a star’s habitable zone. While we are not exactly sure how dependent life is on gravity, it bodes well for the possibility of life if a planet has the similar characteristics as that of the only planet known to host life.

While a minimal amount of details are known to those outside of the conference, we do know that the star the planet orbits an M1 Dwarf, also known as a Red Dwarf.

Artist’s depiction of a Red Dwarf (Source: Wikipedia)

These stars are very small and their masses range from the bare minimum needed for star formation to half that of the Sun. They are also the most common star in the Milky Way.

We also know that there are at least five other planets that are in orbit around this dwarf.

However, it’s probably best to ease up on the speculation and wait until the research is published: when we know more about the planet, then we can continue to consider what this discovery means for the search for life on other planets.

– Nicholas MacDonald

A pill could cure jet lag

painful jet lag source: atomictoaster

The symptoms of a jet lag can be quite varied depending on the amount of time zone alteration. These conditions may last several days. Researchers at the Sleep Research Centre in the University of Surrey ,U.K., discovered that disrupted sleep cycles associated with shift work and jet lag have negative effects on the human health including diabetes and obesity, especially those who travel often due to work .These serious diseases become fatal when the body’s clock is out of sync for extended periods of time. One previous study discovered that jet lag damages the body because significant genes are not switched on. Additionally, the risk of heart attacks and strokes increases by more than 40%.

 

Fortunately, Dr. David Bechtold could possibly lead to an invention of a pill that inhibits the enzyme, CK1epsilon in humans.  Lacking CK1epsilon could adjust to a new light-dark cycle much faster than normal making one cope better when lights are turned on and off at times contrast to their natural day-night pattern. Thus, a pill that inhibits the enzyme could help the body’s clock adapt to sudden changes, assisting people to recover from a jet lag rapidly. These drugs will be available in approximately five years.

 

source: http://www.cbc.ca

 

A peice of history: the oldest known material on Earth

In Australia, on a sheep ranch just 600 Kilometers of Perth, a group of Scientists have just found the oldest known material on Earth.  The zircon crystal is extremely tiny, appearing as a single isolated grain. John Valley, a University of Wisconsin geoscience professor who led the research, used a dating technique called atom probe tomography to accurately date the crystal to an age of 4.4 billion years.

Zircon Crystal (Reuters)

Jack Hills, the region where the crystal was found (earthobservatory.nasa.gov)

In the past, the standard technique for dating materials  was a method called uranium-lead dating.  This method used the radioactive decay of uranium into lead, which one could then use to determine a materials age using half-lives. This would proved extremely useful for zircon dating as their crystalline formation tends to accumulate uranium.

However, some skeptics have argued against the accuracy of the method, as uranium and lead can be known to move around or even escape the zircon crystals through radiation damage. “If there’s a process by where lead can move from one part of the crystal to another place, then the place where lead is concentrated will have an older apparent age and the place from where it moves will have a younger apparent age” Valley said.

Timeline of the history of Earth. For perspective the formation of the earth was at 4.5 billion years while the Jack Hills Zircon was determined to be 4.4 billion years old. (Sydney Morning Herald)

In an attempt to end the debate, John Valley and his group determined the age of the zircon crystals through another technique. The technique, atom probe tomography, is a material analysis technique that gives extensive information about a material such as chemical composition with extreme accuracy.

By using atom probe tomography, the group of researchers managed to examine areas of the crystal with a length as small as 10 nm. At such distances, the effects of uranium-lead movement would be negligible.  As a result of their efforts, Valley and his group have confirmed that the zircon crystal was indeed 4.4 billion years old, hopefully quelling some of the argument.

Link to the Paper:

http://www.nature.com/ngeo/journal/v7/n3/full/ngeo2075.html

 

Felix Tang

5-Second Rule Backed Up by Science?

You have your favourite snack in hand and you’re about to eat it when an arbitrary gust of wind, an evil little leprechaun, or maybe just your own clumsiness causes you to drop it. Darn it! But nonetheless you pick it up, gently blow it off,  and eat it knowing that the “five second rule” is on your side. Or is it?

The Five Second Rule. Image: Pengo (Wikimedia Commons)

 It’s been an age old edibility debate but a new study from a team of students led by microbiology professor Anthony Hitlon at Aston University tells us that the five second rule holds true. They observed the transfer of E.coli and Staphylococcus aureus bacteria from a variety of indoor floor types (carpet, laminate, and tiled surfaces) onto a variety of foods (toast, pasta, cookies, ham, and most ominous, a “sticky dessert”).

 Their findings showed that food picked up just a few seconds after being dropped is less likely to contain bacteria than if it is left for longer periods of time. Therefore, time is a significant factor in the transfer of bacteria from a floor surface to a piece of food. But it’s not just the clock ticking while your meal is on the ground, the type of flooring also comes into play. For example, bacteria was least likely to transfer from carpeted surfaces and most likely to transfer from laminate or tiled surfaces to moist foods when in contact for more than 5 seconds.

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But I think you might want to take this with a grain of salt, and not the ones you’ve dropped on the floor either. Because Hilton notes “consuming food dropped on the floor still carries an infection risk as it very much depends on which bacteria are present on the floor at the time; however the findings of this study will bring some light relief to those who have been employing the five-second rule for years, despite a general consensus that it is purely a myth”. So the next time you drop a delicious snack, you can now breathe a sigh of relief that the five-second grace period has your back.

Written by: Sophia Hu

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Further reading:

http://gizmodo.com/the-five-second-rule-is-now-supported-by-actual-scienti-1542466695

http://www.forbes.com/sites/alicegwalton/2014/03/14/amazingly-science-backs-5-second-rule-for-dropped-food/

http://www.nhs.uk/Livewell/homehygiene/Pages/does-the-five-second-rule-really-work.aspx

http://www.sciencedaily.com/releases/2014/03/140310102212.htm