Category Archives: Science Communication

Banana Lovers Beware: Some “Unap-peel-ing” News

The world’s most popular fruit, the banana, is at risk of dying out due to a fungus that is destroying crops in almost every country it’s grown in. The fungus causes the incurable Panama disease, which is currently killing off the popular species sold across North America and Europe known as the Cavendish banana. Scientists from Wageningen University have traced this fungus for decades, and their most recent findings show that it has spread dangerously fast across the globe.

Bananas

The Cavendish Banana. Source: wikipedia

The fungus is known as Tropical Race 4 (TR4), and is the fourth type of fungus found capable of spreading the Panama disease. So far TR4 has been found in China, Indonesia, Malaysia, Australia, the Philippines, South Africa, and most recently in Jordan, Pakistan, and Lebanon. The fungus targets banana plants through the soil, where it can enter the plant’s roots and block off it’s water source until it wilts and ultimately dies. TR4 spreads by releasing spores, which can live in the soil for up to 30 years after the crops die off.

TR4 is especially dangerous because each spore is a clone of the very first TR4 fungus, meaning every spore has the exact same genetic material. This means every fungus is equally as powerful in killing banana plants, and there is no chance of any fungus having a mutation and being defective. Even worse, banana plants are extremely susceptible to this disease. You may have noticed that bananas don’t have seeds. The reason why is that the Cavendish Banana is sterile, and can only be reproduced from offshoots of adult plants or by growing cells in a nutrient bath. In turn, they are all genetically identical, meaning these bananas are also clones of each other. They are all equally vulnerable to the Panama disease, therefore it spreads very quickly through crops.

Panama_disease_Banana_2

A banana plant killed by the Panama disease carried by TR4 fungus. Source: Wikimedia Commons

This isn’t the first time bananas have been threatened by the Panama disease. In the 1960s, it drove another type of banana, the Gros-Michel, into near-extinction. It was after this devastation that farmers started growing the Cavendish banana. It was originally thought that Cavendish bananas were resistant to the Panama disease, that is until a new strain of the Panama disease carried by the TR4 fungus was found to infect them.

The biggest exporters of bananas in the world, Central and South America, have not yet been hit with the Panama disease. However if we want to stop the bananas we know and love from going extinct, drastic strategy changes in the way we currently grow bananas will need to be made, including finding a new variety of banana that is immune to the deadly effects of the TR4 fungus. Time is running out, and it will take a global effort and commitment in order to stop the increasing spread of TR4 and save the banana.

The following video presented by SciShow gives a great summary of the Panama disease and the extinction of banana plants:

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  • Emma Peachey, March 6, 2016

 

Reverse alkane combustion

Researchers from the University of Texas at Arlington have discovered how to convert carbon dioxide and water into liquid hydrocarbon fuels in a one-step, simple and inexpensive process. Combustion is a chemical reaction that occurs between carbon and oxygen, liberating carbon dioxide and water. The equation for combustion can be shown as: CH4 + O2 –> CO2 + H20. The researchers have determined how to drive the reaction in the opposite direction by using high light intensity, concentrated heat and high pressure. The reaction takes place in a photothermalcatalytic flow reactor, operating optimally at 180-200°C and at 6 atm pressure. During the reaction, carbon dioxide and steam flow over the catalyst bed which is heated by an internal electric heater and simultaneously irradiated with UV light using lamps. The researchers used titanium dioxide as the catalyst which is advantageous because it is a cheap and abundant earth metal.

combustion reaction

Source: Wikimedia Commons combustion reaction

The current process produces small branched aromatics and branched linear hydrocarbons which are useful molecules for gasoline products. However, the best reaction run achieved an efficiency of 13%. Consequently, the current system is not commercially viable. Molecular oxygen is a major by-product of the reaction, detected in yields between 64-150%. Although the efficiency of the process isn’t spectacular, this is a new process and hopefully further research will result in effective modifications.

Future theoretical uses of this technology involve using solar energy to produce liquid hydrocarbons from carbon dioxide and water. Parabolic (U-shaped) mirrors can be used to concentrate the sunlight onto the catalyst. Indeed, sunlight can provide both thermal energy and photons to drive the reaction forward. However, finding an effective photo-catalyst that can absorb photons from the sun is a challenge as the current catalyst, titanium dioxide, is not able to absorb the entire visible light spectrum. The researchers argue that this process, referred to as the solar photothermalchemical alkane combustion process (SPARC) is inexpensive compared to solar biomass gasification and other related processes which produce synthesis gas (carbon monoxide and hydrogen gas). Compressing synthesis gas into usable fuels is very costly.

Source: Wikimedia Commons

Source: Wikimedia Commons Parabolic mirror

The results of this research have huge implications for the future of hydrocarbon fuels. As mentioned in the original research article, producing and consuming fossil fuels using this method could lead to a carbon-neutral fuel cycle. If the efficiency of this process is improved and optimized for large-scale production, arguably the greatest advantage would be that the current automotive and fuel distribution infrastructure would not have to change. However, I believe that a combination of technologies such as hydrogen fuel cells, wind power, solar energy and photovoltaic cells should be utilized appropriately to decrease global carbon dioxide emissions. For example, in certain parts of the world that have low solar insolation, solar energy is not a viable alternative but alkane reverse combustion may be a potential solution.

-Rachel Carr

Krokodil: A Drug That Literally Turns You Into A Zombie

Warning: there are graphic images in this blog post.

While drug usage and addiction has been a problem throughout history, drugs have not always been the easiest vice to access. This may be due to barriers such as strict drug control rules in countries or simply, the drug in question being extremely pricey. However, what if a drug that is relatively unknown and yet sold at lower prices relative to its counterparts suddenly emerged?

Enter Desomorphine, or more commonly known by it’s street name, Krokodil. Despite being around in Siberia since 2002, it only recently hit the shores of North America. This little known drug is an alternative to heroin and is derived from morphineSimilar to other hard drugs, it is highly addictive.

Gangrene

Gangrene is just one of the few deadly effects of Krokodil usage.

However, what sets Krokodil apart from the pack is its deadly effects. Research has found that injecting Krokodil could cause severe damage to the body. Liver and kidney damage as well as rotting gums and bone infection are common problems; with necrosis, gangrene and blood poisoning as icing on top of this very deadly cake. Continued injection of Krokodil could cause a problematic build-up of gangrene  which would lead to amputations or even, a loss of life. 

Of course, Krokodil would not be such a  big problem if it was harder to access compared to other hard drugs. Unfortunately, this is just the opposite. In a recent news site, it was reported that Krokodil prices in Russia go for as low as 5 euros; this, being 10 times lower than Heroin which gooes for aroound 50 euros. With this absurdly low price barriers, many drug addicts who are strapped for cash and need a quick and cheap high could turn to Krokodil as an alternative. It is important that the deadly effects of Krokodil be highlighted so that action can be taken to combat the usage of this drug and people can be educated about the severe risks that lie in its usage. 

A drug that gives a high similar to heroin but at a fraction of the price? To an addict this may sound like the ideal alternative but many fail to read the fine print; another price to pay for their high is to be slowly turned into a rotting pile of flesh. A zombie.

The video below helps to give insight on the lives of Krokodil addicts.

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Credit: Time on Youtube

Intimately Entangled – A Quantum Mechanical Love Story

 

Albert Einstein 1879-1955. Wikimedia Commons

Albert Einstein 1879-1955.
Wikimedia Commons

The man of the hour, Albert Einstein, has made quite an impact throughout the history of theoretical physics. Most recently however, the gravitational waves that Einstein’s theory of relativity predicted were detected on September 14, 2015 at 5:51 a.m.

An intelligent man indeed, yet even the brightest minds can be wrong. For instance, this brilliant theoretical physicist was unable to wrap his mind around an idea that arose from the theory of quantum mechanics – quantum entanglement.

'Intimately entangled' giraffes. Pinterest

‘Intimately entangled’ giraffes.
Pinterest

Quantum entanglement is a phenomenon that allows us to know the state of one particle if we measure the state of it’s partner particle. In essence, these two particles remain intimately ‘entangled’. Einstein remained unsatisfied about the notion that these particles were able to determine each others’ fate even at large distances apart. He argued that this “spooky action at a distance” should not be considered a theory as it holds too much uncertainty.

Due to Einstein’s apprehension towards quantum entanglement, John Stewart Bell came up with Bell’s inequality experiments. Bell’s tests showed a correlation between entangled particles which were a distance apart and this correlation was observed “more than a percentage of the time”.

However, 3 loopholes in Bell’s experiment were discovered and could have eradicated the idea of quantum entanglement had they not been closed by today’s scientists. The first loophole points out that all entangled particles are not detected, meaning that the undetected photons could potentially change the statistical results that support quantum entanglement. The second loophole marks the notion that the entangled particles may affect each other’s state before detection by observers. The final loophole states that this idea may not be random at all, and that the observer is actually unable to detect the pattern.

The first two loopholes were closed by Hanson and his team; their experiment used diamonds to observe the state of all the photons which closed the first loophole, as for the closure of the second loophole, the electrons emitting the photons in their experiment were far enough apart that they were not able to communicate before the observer detected their states. A solution to the final loophole is currently in the works attempting to explore the random nature of the detection of photons. A paper submitted by Dr. Lynden Shalm and his team, that has yet to be peer-reviewed, has shown their attempt at using “random number generators and high-speed polarization measurements” to prove the random behavior of the particles.

The following video by Joe Scott found on YouTube indicates how scientists are currently closing loopholes.

Sorry Einstein, but it seems that quantum entanglement is looking pretty feasible thanks to the work done by scientists. They’ve worked on closing Bell’s loopholes and thus provided support for quantum entanglement.

Working with this theory of quantum entanglement, society can look forward to research into more efficient computing. For instance, in 2013 Google and NASA experimented with a computer that runs 108 times faster than a typical PC, and this is just the beginning.

 

                      – Paria Assadipour

Benefits of Breastfeeding: Breast Milk Contains Sugars that Contribute to Healthy Infant Growth

Were you aware that the thousands of bacteria residing in our gastrointestinal tract (gut) and their interactions with the dietary foods we consume actually have a great impact on human health?

Two 25-milliliter samples of human breast milk. The lefthand sample is first milk produced and the righthand sample is milk produced later during the same pumping.

Two 25-milliliter samples of human breast milk. Source: Wikipedia Commons

Inspired by this discovery, a team of researchers led by Jeffrey Gordon from the Washington University School of Medicine in St.Louis found that the interactions of gut bacteria with the sugars in breast milk promote healthy infant growth.

Why is healthy infant growth a topic of discussion?
Every year, childhood malnutrition causes over 3 million deaths, leads to stunted growth and is associated with impaired cognitive ability.

Branched Oligosaccharide Structure

Branched Oligosaccharide Structure.                  Source: Wikipedia Commons

In Malawai, Africa, almost 50% of children under the age of 5 showed stunted growth. The researchers collected samples of human breast milk from those mothers with healthy babies or stunted babies. They discovered that the amount of oligosaccharides (sugar) in the breast milk containing sialic acid, an essential nutrient for brain development and cognition, were much greater in the mothers with healthy, relative to stunted growth babies.

This finding suggests that the sugars in the breast milk contribute to healthy infant growth. To analyze whether this was the case, the researchers created animal models, ensuring that both the bacteria in the gut and the diet could be manipulated. Gordon and his team began by isolating bacterial strains from fecal matter of the undernourished babies and inserted it into mice or piglets. Then, the researchers fed the mice or the piglets a typical Malawian diet, consisting of legumes, corn, vegetables, and fruit, a diet itself which is insufficient for healthy growth.

Whey

Whey, a by-product of cheesemaking. Source: Wikipedia Commons

With the mice and the piglets mimicking the undernourished Malawian infants, Gordon and his team then began testing effects of the sialic acid-containing sugars. They used cow milk as an alternative because of the difficulty to purify large amounts of sugars from human breast milk. They were able to obtain sialic acid-containing sugars from whey, a by-product of cheesemaking, and fed it to the animals. The mice and piglets showed significant improvements in growth, in both muscle mass and in bone volume. The mice and piglets also showed improved brain development and metabolic activities in the liver.

Because the bacteria in the gut was allowed to be manipulated, the researchers were able to pinpoint which bacterial strains were affected by sialic acid-containing sugars and how the different strains interacted with one another. They found that one strain of bacteria fed on the sialic acid-containing sugars and another strain fed on the digested products of sialic acid-containing sugars. This revealed a possible food web within the bacterial gut community.These two strains of bacteria alone were not sufficient enough to explain healthy growth in the mice and piglets, signifying that more complex interactions among different bacteria in the gut were necessary for growth.

The results of their study were recently published in Cell and serves as the foundation for future studies on the benefits of the components of breast milk on healthy infant growth and its interaction with gut bacteria.

 

Posted on February 22, 2016 By Jenny U

Nanotechnology: The Cure for Cancer?

What is Cancer (disease)?

Cancer is a very well known disease plaguing human society for the last century. It is characterized by abnormally rapid cell division often accompanied by tumor growth; the type of tumor mainly being malignant to be more precise. It is

Cigarette, Source: Wikimedia Commons

Cigarette, Source: Wikimedia Commons

known to sprout from sources known as carcinogen (such as ultraviolet radiation and smoking cigarettes) as well as genetic dispositions.

 

Current Treatment

Current treatments are quite limited and do not have an 100% success rate since there are so many mutations and varieties in cancer. Treatments such as chemotherapy often have lasting side effects. Additionally, there is a likelihood that cancerous cells are not completely eradicated and may resurface in years to come.

The following is the background behind chemotherapy and the effects it has on the human body provided by Dnews on YouTube.

What the Future Holds?

What scientists are trying to obtain is a sustainable as well as safe method of treating cancer. Scientists are looking into stem cell research, protein inhibition (protein Kinase inhibition) and artificial intelligence as potential methods. But, perhaps one of the most promising of the potential treatments is nanotechnology.

*Credit to Inquisitr.com for providing these different potential treatment methods.*

Nanotechnology and Cancer Treatment

Nanoparticles are as small as cell organelles with great flexibility when it

Mesoporous silica, Source: Wikimedia Commons

Mesoporous silica, Source: Wikimedia Commons

comes to shape, size and composition. Research by scientists have found a mesoporous silicon nano particle that is able to encase azobenzene molecules within its membrane pores as well as carry different sized substrates inside the particle itself.  It is important to note the fact that azobenzene switches its orientation/ configuration (cis/trans) when exposed to light and its size changes when going from cis to trans. This  means that the permeability of the silica nanoparticle can be regulated by the azobenzene molecular configuration.  Small pellets of anti-cancer drugs can be inserted into the silica nanoparticles and injected into the human body. With controlled light exposure and intensity, the size of azobenzene changes releasing the substrate into the cancer cell targeting either just the cancerous components or the entire cell.  The following video uploaded by FGRGAnimation made by Frank Gu from the University of Waterloo outlines the process of osmosis and cell substrate concentration in regulating and controlling transport in a nanoparticle.

This process will be safe due to the high control levels in the real (in vivo) environment. We are able to selectively insert the amount of substrate into the nanoparticles to control concentration and light intensity. Thus, the correct dosage is always applied. Interestingly, the treatment  process can be both selective or general meaning scientists are able to use substrate specifically targeting cancerous components in a cell or the entire cancer cell.

Although the focus was on nanoparticles and nanotechnology, any of the the aforementioned 4 methods can be an important breakthrough in cancer treatments if proven experimentally successful.

Posted by Ming Lun (Allan) Zhu

 

Martian Life a Possibility

Last September, NASA scientists, using image spectroscopy on the Mars Reconnaissance Orbiter, had published new evidence in support of the hypothesis that present day water flows on the surface of Mars. It is often said that where there is water, there is usually life; but what kind of life can exist in such an extreme environment?

YouTube Preview Image

A recently published study by a group of European Researchers has shown that certain fungi and lichens on Earth have the ability to survive in conditions similar to Mars for an extended period of time. The study is ongoing and will involve several more Fungi and Lichen species as part of the Lichens and Fungi Experiment (LIFE).

"Lichen" by Brittany. From Flickr. Licensed under CC 2.0.

“Lichen” by Brittany. From Flickr. Licensed under CC 2.0.

The two types of fungi collected come from the cryptoendolithic family: the Cryomyces antarcticus and Cryomyces minteri. The organisms were taken from within cracks of rocks found in the McMurdo Dry Valleys in Antarctica. Strong winds, cold temperatures and no precipitation characterize this region. The samples were placed in cells and attached to the ISS via the EXPOSE-E platform.

EXPOSE-E Platform Installation. From Astronomy Magazine.

EXPOSE-E Platform Installation. From Astronomy Magazine.

For a year and a half, half the fungi were subject to Mars-like conditions while the others were exposed to regular conditions in space. The results show that not only did 60% of cells remain unharmed but many were able to resume and even increase cellular activity.

If these lifeforms can survive on the surface of Mars, it may be possible that Martian life already exists. The challenge now for NASA, the European Space Agency and other scientists is to send humans to Mars without contaminating the region.

Do you think that within the century we will discover the first examples of extraterrestrial life?

-Johnny Lazazzera

One time solution- Universal Flu Shot

Are you tired of getting vaccinated every flu season? Do you want to be protected but refuse to be poked? Fear no more, the universal flu shot is here (well not yet, but almost).

shots-shots-shotsCredit: WeKnowMemes

Every flu season millions flock to receive that seasons flu shot. Have you ever wondered why you can be vaccinated just once and be protected for life for diseases such as mumps and measles but not the flu?

This can be answered by the characteristics of the flu. There are 3 known types of flu viruses but only 2 types of flu viruses which cause the annual flu. The types that cause the flu are A and B. However, these have many subtypes which change every season because of the genetic changes undergone by the head region. So every season the World Health Organization is given predictions of the strain of flu that scientists believe is circulating that year. Using this information that seasons vaccine is chosen. However, the educated predictions made to create the flu shot fail to be completely effective as they can only protect up to 3-4 strains of that flu. Therefore, it is difficult to create a vaccine every year that is completely successful in protecting us against the annual flu. This is one of the main reasons why developing an all-in-one flu shot is of much interest.

There have been many attempts to try and create the all-in-one flu shot. The difficulty is creating one that can account for the different strains. A recent study, in Nature Science,  has came up with an innovative solution to creating a universal flu shot which may solve the issue that the flu changes every year.

In their approach they focus on the proteins on the outside of the antibody. These proteins are comprised of a head and a stem. The head, in flu vaccines being hemagglutinin (HA), can mutate and it is the reason for the various faces of the flu. However, the stem doesn’t mutate as easily as the HA. The new vaccine uses this information and focuses on the stem instead of the head. If our bodies can recognize the stem and create antibodies according to the stem, it would be able to create antibodies to protect one against all strains of the flu; this would account for all the changes in the HA.

The following video gives a brief overview of how the vaccines work and how this universal flu vaccine would work.

Credit: Discovery News

This study has been proven successful in rats and chimps, however it must be researched and perfected before it can be used in humans. The difficulties of creating an all-in-one shot is the ability of the flu to change itself. Focusing on the stem instead of the head may be the way to success. Thankfully, this innovation is on a uphill and our future for the all-in-one flu shot is looking bright!

-Vanessa